Protein ZmOrphan249
ZmOrphan249 is a protein in the Orphans family.
Information
Orphans Name: ZmOrphan249
Species: Maize
Orphans Family: Orphans
Gene Name(Synonym): PRH12
Uniprot ID: K7UR25

Protein ZmOrphan249

ZmOrphan249 is a protein in the Orphans family.

Overview of domains present in v5 transcripts
PF00481
Zm00001eb294200_T002
Zm00001eb294200_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d038846DAPseq no logo sequence fimo position
Zm00001d038846DAPseq no logo sequence fimo position
Zm00001d038846ChIPseq no logo sequence fimo position
Zm00001d038846PChIPseq no logo sequence fimo position

Interactions where ZmOrphan249 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmOrphan249 is the target  
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There are 257 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb294200_T002 from maize genome v5

Amino Acid Sequence
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MAAAMCVDDEAASAAAESAGVDKLDLGAAAGGKRSVYLMDCAPVWGCASTRGRSAEMEDACAAAPRFADVPVRLLASRRD
LDGLGLDAGALRLPAHLFGVFDGHGGAEVANYCRERLQVLLRQELRLLGEDLGQISCDVDMKEHWDELFTGCFQRLDDEV
SGQASRLVGAVQESRPVAAENVGSTAVVAVVCSSHVVVANCGDSRAVLCRGKEPVELSIDHKPDRKDERARIEALGGKVI
QWNGYRVSGILAMSRSIGDRYLKPFVIPKPEVTVVPRAKDDDCLILASDGLWDVVSNEEACKAARRQIQLWHKNNGVTSS
LCDEGDESNDPAAQAAADYLMRLALKKGTEDNITVIVVDLKPRKKAKSNS

MAAAMCVDDEAASAAAESAGVDKLDLGAAAGGKRSVYLMDCAPVWGCASTRGRSAEMEDACAAAPRFADVPVRLLASRRD
LDGLGLDAGALRLPAHLFGVFDGHGGAEVANYCRERLQVLLRQELRLLGEDLGQISCDVDMKEHWDELFTGCFQRLDDEV
SGQASRLVGAVQESRPVAAENVGSTAVVAVVCSSHVVVANCGDSRAVLCRGKEPVELSIDHKPDRKDERARIEALGGKVI
QWNGYRVSGILAMSRSIGDRYLKPFVIPKPEVTVVPRAKDDDCLILASDGLWDVVSNEEACKAARRQIQLWHKNNGVTSS
LCDEGDESNDPAAQAAADYLMRLALKKGTEDNITVIVVDLKPRKKAKSNS

MAAAMCVDDEAASAAAESAGVDKLDLGAAAGGKRSVYLMDCAPVWGCASTRGRSAEMEDACAAAPRFADVPVRLLASRRD
LDGLGLDAGALRLPAHLFGVFDGHGGAEVANYCRERLQVLLRQELRLLGEDLGQISCDVDMKEHWDELFTGCFQRLDDEV
SGQASRLVGAVQESRPVAAENVGSTAVVAVVCSSHVVVANCGDSRAVLCRGKEPVELSIDHKPDRKDERARIEALGGKVI
QWNGYRVSGILAMSRSIGDRYLKPFVIPKPEVTVVPRAKDDDCLILASDGLWDVVSNEEACKAARRQIQLWHKNNGVTSS
LCDEGDESNDPAAQAAADYLMRLALKKGTEDNITVIVVDLKPRKKAKSNS

MAAAMCVDDEAASAAAESAGVDKLDLGAAAGGKRSVYLMDCAPVWGCASTRGRSAEMEDACAAAPRFADVPVRLLASRRD
LDGLGLDAGALRLPAHLFGVFDGHGGAEVANYCRERLQVLLRQELRLLGEDLGQISCDVDMKEHWDELFTGCFQRLDDEV
SGQASRLVGAVQESRPVAAENVGSTAVVAVVCSSHVVVANCGDSRAVLCRGKEPVELSIDHKPDRKDERARIEALGGKVI
QWNGYRVSGILAMSRSIGDRYLKPFVIPKPEVTVVPRAKDDDCLILASDGLWDVVSNEEACKAARRQIQLWHKNNGVTSS
LCDEGDESNDPAAQAAADYLMRLALKKGTEDNITVIVVDLKPRKKAKSNS

MAAAMCVDDEAASAAAESAGVDKLDLGAAAGGKRSVYLMDCAPVWGCASTRGRSAEMEDACAAAPRFADVPVRLLASRRD
LDGLGLDAGALRLPAHLFGVFDGHGGAEVANYCRERLQVLLRQELRLLGEDLGQISCDVDMKEHWDELFTGCFQRLDDEV
SGQASRLVGAVQESRPVAAENVGSTAVVAVVCSSHVVVANCGDSRAVLCRGKEPVELSIDHKPDRKDERARIEALGGKVI
QWNGYRVSGILAMSRSIGDRYLKPFVIPKPEVTVVPRAKDDDCLILASDGLWDVVSNEEACKAARRQIQLWHKNNGVTSS
LCDEGDESNDPAAQAAADYLMRLALKKGTEDNITVIVVDLKPRKKAKSNS

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00481
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Nucleotide Sequence
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GTCATCCCTGTCGCCAACGGCAGCG...

GRMZM2G177386_T01 from maize genome v3

Amino Acid Sequence
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MAAAMCVDDEAASAAAESAGVDKLDLGAAAGGKRSVYLMDCAPVWGCASTRGRSAEMEDACAAAPRFADVPVRLLASRRD
LDGLGLDAGALRLPAHLFGVFDGHGGAEVANYCRERLQVLLRQELRLLGEDLGQISCDVDMKEHWDELFTGCFQRLDDEV
SGQASRLVGAVQESRPVAAENVGSTAVVAVVCSSHVVVANCGDSRAVLCRGKEPVELSIDHKVSLCFCLERGMMAIVRFT
RGCFSLTGRMSARGLRPWEARSSNGTAIGSPVYLLCQDRLGTDI

Nucleotide Sequence
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GACCCTCCCCAGCGGCGTGACGAGT...

GRMZM2G177386_T02 from maize genome v3

Amino Acid Sequence
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MAAAMCVDDEAASAAAESAGVDKLDLGAAAGGKRSVYLMDCAPVWGCASTRGRSAEMEDACAAAPRFADVPVRLLASRRD
LDGLGLDAGALRLPAHLFGVFDGHGGAEVANYCRERLQVLLRQELRLLGEDLGQISCDVDMKEHWDELFTGCFQRLDDEV
SGQASRLVGAVQESRPVAAENVGSTAVVAVVCSSHVVVANCGDSRAVLCRGKEPVELSIDHKPDRKDERARIEALGGKVI
QWNGYRVSGILAMSRSIGDRYLKPFVIPKPEVTVVPRAKDDDCLILASDGLWDVVSNEEACKAARRQIQLWHKNNGVTSS
LCDEGDESNDPAAQAAADYLMRLALKKGTEDNITVIVVDLKPRKKAKSNS

Nucleotide Sequence
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GACCCTCCCCAGCGGCGTGACGAGT...

GRMZM2G177386_T03 from maize genome v3


Related TFome: pUT6499

Amino Acid Sequence
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MRLALKKGTEDNITVIVVDLKPRKKAKSNS

Nucleotide Sequence
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CTGTTGAAAAGCCATCTTTAATCGA...

Zm00001d038846_T001 from maize genome v4

Amino Acid Sequence
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MAAAMCVDDEAASAAAESAGVDKLDLGAAAGGKRSVYLMDCAPVWGCASTRGRSAEMEDACAAAPRFADVPVRLLASRRD
LDGLGLDAGALRLPAHLFGVFDGHGGAEVANYCRERLQVLLRQELRLLGEDLGQISCDVDMKEHWDELFTGCFQRLDDEV
SGQASRLVGAVQESRPVAAENVGSTAVVAVVCSSHVVVANCGDSRAVLCRGKEPVELSIDHKPDRKDERARIEALGGKVI
QWNGYRVSGILAMSRSIGDRYLKPFVIPKPEVTVVPRAKDDDCLILASDGLWDVVSNEEACKAARRQIQLWHKNNGVTSS
LCDEGDESNDPAAQAAADYLMRLALKKGTEDNITVIVVDLKPRKKAKSNS

Nucleotide Sequence
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GTTGGCTGCATACCCGTACAGTACG...

Zm00001eb294200_T001 from maize genome v5

Amino Acid Sequence
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MAAAMCVDDEAASAAAESAGVDKLDLGAAAGGKRSVYLMDCAPVWGCASTRGRSAEMEDACAAAPRFADVPVRLLASRRD
LDGLGLDAGALRLPAHLFGVFDGHGGAEVANYCRERLQVLLRQELRLLGEDLGQISCDVDMKEHWDELFTGCFQRLDDEV
SGQASRLVGAVQESRPVAAENVGSTAVVAVVCSSHVVVANCGDSRAVLCRGKEPVELSIDHKVSLCFCLERGMMAIVRFT
RGCFSLTGRMSARGLRPWEARSSNGTAIGSPVYLLCQDRLGTDI

Nucleotide Sequence
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GTCATCCCTGTCGCCAACGGCAGCG...


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